NERSC at SC05

Posters:

HPSS at NERSC INCITE at NERSC

Magneto-rotational Instability and Turbulent Angular Momentum Transport (Fausto Cattaneo, Paul Fischer and Aleksandr Obabko) [ PPT | PDF] High-res animations of flow structure:

• Velocity (289 MB)
• Magnetic field (335 MB)

Direct Numerical Simulation of Turbulent Nonpremixed Combustion – Fundamental Insights towards Predictive Modeling (Evatt Hawkes and Jacqueline Chen) [ PPT | PDF]

Dynameomics: Protein Mechanics, Folding and Unfolding through Large-Scale All-Atom Molecular Dynamics Simulations (Valerie Daggett and David Beck) [ PPT | PDF]
Animations:

• Unfolding simulation of 1erd at 498 Kelvin, water removed and protein atoms shown as mesh (92 MB)
• Native state molecular dynamics simulation of 1ev4 at 298 Kelvin, water removed and protein depicted schematically (36 MB)
• Unfolding simulation of 1qcv at 498 Kelvin, water removed and protein depicted schematically (7 MB)
• Unfolding simulation of 4pga at 498 Kelvin, wate and hydrogens removed, protein in ribbons (29 MB)

Booth Presentations

Getting the Most out of HPC Networks Using One-Sided Communication (Kathy Yelick)

Large-Scale Performance Analysis Using the BIPS Application Benchmark Suite (Leonid Oliker)

Architecture Characterization using APEX-Map (Erich Strohmaier)

What’s New at NERSC and Berkeley Lab (Horst Simon)

Core Collapse Supernovae: Trying to Explode Stars at NERSC [PPT] (Douglas Swesty and Eric Myra) [PDF]

Nanoscience on High Performance Computers: From Methods to Codes to Applications (Andrew Canning)

Cybersecurity for Distributed Science: Fortifying the Front-lines of the Cybersecurity War (Deb Agarwal)

10 Gigabit Ethernet Testing in ESnet (Joe Metzger)

Query-Driven Visualization (Wes Bethel)

ACTS: An Infrastructure for Maintaining DOE Software (Osni Marques and Tony Drummond)